Multiple alignment-free sequence comparison
نویسندگان
چکیده
منابع مشابه
Multiple alignment-free sequence comparison
MOTIVATION Recently, a range of new statistics have become available for the alignment-free comparison of two sequences based on k-tuple word content. Here, we extend these statistics to the simultaneous comparison of more than two sequences. Our suite of statistics contains, first, C(*)1 and C(S)1, extensions of statistics for pairwise comparison of the joint k-tuple content of all the sequenc...
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MOTIVATION Alignment-free methods for sequence comparison are increasingly used for genome analysis and phylogeny reconstruction; they circumvent various difficulties of traditional alignment-based approaches. In particular, alignment-free methods are much faster than pairwise or multiple alignments. They are, however, less accurate than methods based on sequence alignment. Most alignment-free ...
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ژورنال
عنوان ژورنال: Bioinformatics
سال: 2013
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/btt462